X-Git-Url: http://nitlanguage.org

diff --git a/contrib/neo_doxygen/src/neo_doxygen.nit b/contrib/neo_doxygen/src/neo_doxygen.nit
index d70f008..30421eb 100644
--- a/contrib/neo_doxygen/src/neo_doxygen.nit
+++ b/contrib/neo_doxygen/src/neo_doxygen.nit
@@ -22,7 +22,6 @@ import model
 import doxml
 import graph_store
 import console
-import flush_stdout
 import opts
 
 # An importation task.
@@ -60,11 +59,10 @@ class NeoDoxygenJob
 		else
 			printn "Reading {dir}... "
 		end
-		flush_stdout
 		loop
 			for f in list_files(dir) do
 				var path = dir/f
-				if path.file_stat.is_dir then
+				if path.file_stat.as(not null).is_dir then
 					directories.push(path)
 				else if f.has_suffix(".xml") and f != "index.xml" then
 					reader.read(path)
@@ -74,13 +72,13 @@ class NeoDoxygenJob
 			if directories.length <= 0 then break
 			dir = directories.pop
 		end
+		model.add_global_modules
 		print "Done."
 		if file_count < 2 then
 			print "{file_count} file read."
 		else
 			print "{file_count} files read."
 		end
-		flush_stdout
 	end
 
 	# List files in a directory.
@@ -106,7 +104,6 @@ class NeoDoxygenJob
 	# Save the graph.
 	fun save do
 		sys.stdout.write "Linking nodes...{term_save_cursor} "
-		flush_stdout
 		model.put_edges
 		print "{term_rewind} Done."
 		var nodes = model.all_nodes
@@ -152,6 +149,7 @@ class NeoDoxygenCommand
 	init do
 		sources["any"] = new DefaultSource
 		sources["java"] = new JavaSource
+		sources["python"] = new PythonSource
 
 		var prefix = new OptionText("""
 {{{"NAME".bold}}}
@@ -188,7 +186,7 @@ class NeoDoxygenCommand
 
 		var keys = new Array[String].from(sources.keys)
 		opt_src_lang = new OptionEnum(keys,
-				"The programming language to assume when processing chunk in the declarations left as-is by Doxygen. Use `any` (the default) to disable any language-specific processing.",
+				"The programming language to assume when processing chunks in the declarations left as-is by Doxygen. Use `any` (the default) to disable any language-specific processing.",
 				keys.index_of("any"), "--src-lang")
 		option_context.add_option(opt_src_lang)
 	end
@@ -201,7 +199,7 @@ class NeoDoxygenCommand
 		end
 		option_context.parse(args)
 
-		var errors = option_context.get_errors
+		var errors = option_context.errors
 		var rest = option_context.rest
 
 		if errors.is_empty and not opt_help.value and rest.length != 2 then
@@ -252,8 +250,8 @@ end
 
 # Add handling of multi-line descriptions.
 #
-# Note: The algorithm is naive and do not handle internationalisation and
-# escape sequences.
+# Note: The algorithm is naive and do not handle internationalisation,
+# multi-byte characters and control characters.
 redef class Option
 
 	redef fun pretty(off) do